Percolation/Mean cluster density

From Rosetta Code
Percolation/Mean cluster density is a draft programming task. It is not yet considered ready to be promoted as a complete task, for reasons that should be found in its talk page.

Percolation Simulation
This is a simulation of aspects of mathematical percolation theory.

For other percolation simulations, see Category:Percolation Simulations, or:
1D finite grid simulation
Mean run density
2D finite grid simulations

Site percolation | Bond percolation | Mean cluster density

Let be a 2D boolean square matrix of values of either 1 or 0 where the probability of any value being 1 is , (and of 0 is therefore ).

Define a cluster of 1's as being a group of 1's connected vertically or horizontally (i.e., using the Von Neumann neighborhood rule) and bounded by either or by the limits of the matrix. Let the number of such clusters in such a randomly constructed matrix be .

Percolation theory states that as tends to infinity is a constant.

is called the mean cluster density and for is found numerically to approximate ...

Task

Any calculation of for finite is subject to randomnes so should be computed as the average of runs, where .
Show the effect of varying on the accuracy of simulated for and for values of up to at least .

For extra credit, graphically show clusters in a , grid.

Show your output here.

See also

D

Translation of: python

<lang d>import std.stdio, std.algorithm, std.random, std.math, std.array,

      std.range, std.ascii;

alias Cell = ubyte; alias Grid = Cell[][]; enum Cell notClustered = 1; // Filled cell, but not in a cluster.

FP rand(FP = double, UniformRandomNumberGenerator) //

           (ref UniformRandomNumberGenerator urng) {
   immutable FP result = urng.front / cast(FP)urng.max;
   urng.popFront;
   return result;

}

Grid initialize(Grid grid, in double prob, ref Xorshift rng) /*nothrow*/ {

   foreach (row; grid)
       foreach (ref cell; row)
           cell = cast(Cell)(rng.rand < prob);
   return grid;

}

void show(in Grid grid) {

   immutable static cell2char = " #" ~ letters;
   writeln('+', std.array.replicate("-", grid.length), '+');
   foreach (row; grid) {
       write('|');
       row.map!(c => c < cell2char.length ? cell2char[c] : '@').write;
       writeln('|');
   }
   writeln('+', std.array.replicate("-", grid.length), '+');

}

size_t countClusters(bool justCount=false)(Grid grid) pure nothrow {

   immutable side = grid.length;
   static if (justCount)
       enum Cell clusterID = 2;
   else
       Cell clusterID = 1;
   void walk(in size_t r, in size_t c) nothrow {
       grid[r][c] = clusterID; // Fill grid.
       if (r < side - 1 && grid[r + 1][c] == notClustered) // Down.
           walk(r + 1, c);
       if (c < side - 1 && grid[r][c + 1] == notClustered) // Right.
           walk(r, c + 1);
       if (c > 0 && grid[r][c - 1] == notClustered) // Left.
           walk(r, c - 1);
       if (r > 0 && grid[r - 1][c] == notClustered) // Up.
           walk(r - 1, c);
   }
   size_t nClusters = 0;
   foreach (immutable r; 0 .. side)
       foreach (immutable c; 0 .. side)
           if (grid[r][c] == notClustered) {
               static if (!justCount)
                   clusterID++;
               nClusters++;
               walk(r, c);
           }
   return nClusters;

}

double clusterDensity(Grid grid, in double prob, ref Xorshift rng) {

   return grid.initialize(prob, rng).countClusters!true /
          cast(double)(grid.length ^^ 2);

}

void showDemo(in size_t side, in double prob, ref Xorshift rng) {

   auto grid = new Grid(side, side);
   grid.initialize(prob, rng);
   writefln("Found %d clusters in this %d by %d grid:\n",
            grid.countClusters, side, side);
   grid.show;

}

void main() {

   immutable prob = 0.5;
   immutable nIters = 5;
   auto rng = Xorshift(unpredictableSeed);
   showDemo(15, prob, rng);
   writeln;
   foreach (immutable i; iota(4, 14, 2)) {
       immutable side = 2 ^^ i;
       auto grid = new Grid(side, side);
       immutable density = nIters
                           .iota
                           .map!(_ => grid.clusterDensity(prob, rng))
                           //.sum / nIters;
                           .reduce!q{a + b} / nIters;
       writefln("n_iters=%3d, p=%4.2f, n=%5d, sim=%7.8f",
                nIters, prob, side, density);
   }

}</lang>

Output:
Found 26 clusters in this 15 by 15 grid:

+---------------+
| AA B    CCCC  |
|AA D E F CC  G |
|  DDD FF  CC  H|
| I D FF  J   K |
|  L  FF JJJJ   |
|L LLL      J  M|
|LLLLLL   JJJ MM|
|L LL L N  J   M|
|LL    O P J   M|
|LLL QQ R JJ  S |
|LL T  RR  J SSS|
| L   U  V JJ  S|
|  WW  XX JJ YY |
|    XXX   JJ YY|
|ZZ   XXX   JJ  |
+---------------+

n_iters=  5, p=0.50, n=   16, sim=0.09765625
n_iters=  5, p=0.50, n=   64, sim=0.07260742
n_iters=  5, p=0.50, n=  256, sim=0.06679993
n_iters=  5, p=0.50, n= 1024, sim=0.06609497
n_iters=  5, p=0.50, n= 4096, sim=0.06580237

Increasing the index i to 15:

n_iters=  5, p=0.50, n=32768, sim=0.06578374

Python

<lang python>from __future__ import division from random import random import string from math import fsum

n_range, p, t = (2**n2 for n2 in range(4, 14, 2)), 0.5, 5 N = M = 15

NOT_CLUSTERED = 1 # filled but not clustered cell cell2char = ' #' + string.ascii_letters

def newgrid(n, p):

   return [[int(random() < p) for x in range(n)] for y in range(n)]

def pgrid(cell):

   for n in range(N):
       print( '%i)  ' % (n % 10) 
              + ' '.join(cell2char[cell[n][m]] for m in range(M)))


def cluster_density(n, p):

   cc = clustercount(newgrid(n, p))
   return cc / n / n

def clustercount(cell):

   walk_index = 1
   for n in range(N):
       for m in range(M):
           if cell[n][m] == NOT_CLUSTERED:
               walk_index += 1
               walk_maze(m, n, cell, walk_index)
   return walk_index - 1
       

def walk_maze(m, n, cell, indx):

   # fill cell 
   cell[n][m] = indx
   # down
   if n < N - 1 and cell[n+1][m] == NOT_CLUSTERED:
       walk_maze(m, n+1, cell, indx)
   # right
   if m < M - 1 and cell[n][m + 1] == NOT_CLUSTERED:
       walk_maze(m+1, n, cell, indx)
   # left
   if m and cell[n][m - 1] == NOT_CLUSTERED:
       walk_maze(m-1, n, cell, indx)
   # up
   if n and cell[n-1][m] == NOT_CLUSTERED:
       walk_maze(m, n-1, cell, indx)


if __name__ == '__main__':

   cell = newgrid(n=N, p=0.5)
   print('Found %i clusters in this %i by %i grid\n' 
         % (clustercount(cell), N, N))
   pgrid(cell)
   print()
   
   for n in n_range:
       N = M = n
       sim = fsum(cluster_density(n, p) for i in range(t)) / t
       print('t=%3i p=%4.2f n=%5i sim=%7.5f'
             % (t, p, n, sim))</lang>
Output:
Found 20 clusters in this 15 by 15 grid

0)  a a     b     c       d d d d
1)  a a   e     f   g g   d      
2)        e   f f f       d      
3)  h h   e     f   i i   d d    
4)        e       j     d d d d  
5)    k k   k   k   l         d d
6)  k k k k k   k   l   m   n    
7)  k k k   k   k   l     o   p p
8)      k   k k k   l l l   q    
9)  k     k k k k     l     q q q
0)  k   k k k         l     q q q
1)  k k     k k k       r r      
2)  k     k k       r r r   s s  
3)  k k k k   r r r r r     s s  
4)  k   k   t   r   r r     s s  

t=  5 p=0.50 n=   16 sim=0.08984
t=  5 p=0.50 n=   64 sim=0.07310
t=  5 p=0.50 n=  256 sim=0.06706
t=  5 p=0.50 n= 1024 sim=0.06612
t=  5 p=0.50 n= 4096 sim=0.06587

As n increases, the sim result gets closer to 0.065770...