Deconvolution/2D+: Difference between revisions

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* The <code>deconv</code> function will need to be parameterized by the dimension <math>\mathit d</math> unless the dimension can be inferred from the data structures representing <math>\mathit g</math> and <math>\mathit f</math>.
* The <code>deconv</code> function will need to be parameterized by the dimension <math>\mathit d</math> unless the dimension can be inferred from the data structures representing <math>\mathit g</math> and <math>\mathit f</math>.
* There may be more equations than unknowns. If convenient, use a function from a [http://www.netlib.org/lapack/lug/node27.html library] that finds the best fitting solution to an overdetermined system of linear equations (as in the [[Multiple regression]] task). Otherwise, prune the set of equations as needed and solve as in the [[Reduced row echelon form]] task.
* There may be more equations than unknowns. If convenient, use a function from a [http://www.netlib.org/lapack/lug/node27.html library] that finds the best fitting solution to an overdetermined system of linear equations (as in the [[Multiple regression]] task). Otherwise, prune the set of equations as needed and solve as in the [[Reduced row echelon form]] task.
* Debug your solution using the following [[http://drop.io/yatxacy data]]. Be sure to verify both that the deconvolution of <math>\mathit g</math> with <math>\mathit f</math> is <math>\mathit h</math> and that the deconvolution of <math>\mathit g</math> with <math>\mathit h</math> is <math>\mathit f</math>. Display the results in a human readable form for only the three dimensional case ''only''.
* Debug your solution using [http://rosettacode.org/mw/index.php?title=Deconvolution/2D%2B/Test_data&action=raw this test data], of which a portion is shown below. Be sure to verify both that the deconvolution of <math>\mathit g</math> with <math>\mathit f</math> is <math>\mathit h</math> and that the deconvolution of <math>\mathit g</math> with <math>\mathit h</math> is <math>\mathit f</math>. Display the results in a human readable form for the three dimensional case ''only''.


dimension 1:
dimension 1:

Revision as of 16:42, 3 March 2010

Task
Deconvolution/2D+
You are encouraged to solve this task according to the task description, using any language you may know.

This task is a straightforward generalization of Deconvolution/1D to higher dimensions. For example, the one dimensional case would be applicable to audio signals, whereas two dimensions would pertain to images. Define the discrete convolution in dimensions of two functions

taking -tuples of integers to real numbers as the function

also taking -tuples of integers to reals and satisfying

for all -tuples of integers . Assume and (and therefore ) are non-zero over only a finite domain bounded by the origin, hence possible to represent as finite multi-dimensional arrays or nested lists , , and .

For this task, implement a function (or method, procedure, subroutine, etc.) deconv to perform deconvolution (i.e., the inverse of convolution) by solving for given and . (See Deconvolution/1D for details.)

  • The function should work for of arbitrary length in each dimension (i.e., not hard coded or constant) and of any length up to that of in the corresponding dimension.
  • The deconv function will need to be parameterized by the dimension unless the dimension can be inferred from the data structures representing and .
  • There may be more equations than unknowns. If convenient, use a function from a library that finds the best fitting solution to an overdetermined system of linear equations (as in the Multiple regression task). Otherwise, prune the set of equations as needed and solve as in the Reduced row echelon form task.
  • Debug your solution using this test data, of which a portion is shown below. Be sure to verify both that the deconvolution of with is and that the deconvolution of with is . Display the results in a human readable form for the three dimensional case only.

dimension 1:

h: [-8, 2, -9, -2, 9, -8, -2]
f: [ 6, -9, -7, -5]
g: [-48, 84, -16, 95, 125, -70, 7, 29, 54, 10]

dimension 2:

h: [
      [-8, 1, -7, -2, -9, 4], 
      [4, 5, -5, 2, 7, -1], 
      [-6, -3, -3, -6, 9, 5]]
f: [
      [-5, 2, -2, -6, -7], 
      [9, 7, -6, 5, -7], 
      [1, -1, 9, 2, -7], 
      [5, 9, -9, 2, -5], 
      [-8, 5, -2, 8, 5]]
g: [
      [40, -21, 53, 42, 105, 1, 87, 60, 39, -28], 
      [-92, -64, 19, -167, -71, -47, 128, -109, 40, -21], 
      [58, 85, -93, 37, 101, -14, 5, 37, -76, -56], 
      [-90, -135, 60, -125, 68, 53, 223, 4, -36, -48], 
      [78, 16, 7, -199, 156, -162, 29, 28, -103, -10], 
      [-62, -89, 69, -61, 66, 193, -61, 71, -8, -30], 
      [48, -6, 21, -9, -150, -22, -56, 32, 85, 25]]

dimension 3:

h: [
      [[-6, -8, -5, 9], [-7, 9, -6, -8], [2, -7, 9, 8]], 
      [[7, 4, 4, -6], [9, 9, 4, -4], [-3, 7, -2, -3]]]
f: [
      [[-9, 5, -8], [3, 5, 1]], 
      [[-1, -7, 2], [-5, -6, 6]], 
      [[8, 5, 8],[-2, -6, -4]]]
g: [
      [
         [54, 42, 53, -42, 85, -72], 
         [45, -170, 94, -36, 48, 73], 
         [-39, 65, -112, -16, -78, -72], 
         [6, -11, -6, 62, 49, 8]], 
      [
         [-57, 49, -23, 52, -135, 66], 
         [-23, 127, -58, -5, -118, 64], 
         [87, -16, 121, 23, -41, -12], 
         [-19, 29, 35, -148, -11, 45]], 
      [
         [-55, -147, -146, -31, 55, 60], 
         [-88, -45, -28, 46, -26, -144], 
         [-12, -107, -34, 150, 249, 66], 
         [11, -15, -34, 27, -78, -50]], 
      [
         [56, 67, 108, 4, 2, -48], 
         [58, 67, 89, 32, 32, -8], 
         [-42, -31, -103, -30, -23, -8],
         [6, 4, -26, -10, 26, 12]]]


Ursala

This is done mostly with list operations that are either primitive or standard library functions in the language (e.g., zipp, zipt, and pad). The equations are solved by the dgelsd function from the Lapack library. The break function breaks a long list into a sequence of sublists according to a given template, and the band function is taken from the Deconvolution/1D solution. <lang Ursala>#import std

  1. import nat

break = ~&r**+ zipt*+ ~&lh*~+ ~&lzyCPrX|\+ -*^|\~&tK33 :^/~& 0!*t

band = pad0+ ~&rSS+ zipt^*D(~&r,^lrrSPT/~&ltK33tx zipt^/~&r ~&lSNyCK33+ zipp0)^/~&rx ~&B->NlNSPC ~&bt

deconv = # takes a natural number n to the n-dimensional deconvolution function

~&?\math..div! iota; ~&!*; @h|\; (~&al^?\~&ar break@alh2faltPrXPRX)^^(

  ~&B->NlC~&bt*++ gang@t+ ~~*,
  lapack..dgelsd^^(
     (~&||0.!**+ ~&B^?a\~&Y@a ^lriFhNSS2iDrlYSK7LS2SL2rQ/~&alt band@alh2faltPrDPMX)^|\~&+ gang,
     @t =>~&l ~&L+@r))</lang>

The equations tend to become increasingly sparse in higher dimensions, so the following alternative implementation uses the sparse matrix solver from the [UMFPACK] library instead of Lapack, which is also callable in Ursala, adjusted as shown for the different [calling convention]. <lang Ursala>deconv = # takes a number n to the n-dimensional deconvolution function

~&?\math..div! iota; ~&!*; @h|\; -+

  //+ ~&al^?\~&ar @alh2faltPrXPRX @liX ~&arr2arl2arrh3falrbt2XPRXlrhPCrtPCPNfallrrPXXPRCQNNCq,
  ^^/-+~&B->NlC~&bt*+,gang@t,~~*+- (umf..di_a_trp^/~&DSLlrnPXrmPXS+num@lmS ^niK10mS/num@r ~&lnS)^^(
     gang; ^|\~&; //+ -+
        ^niK10/~& @NnmlSPASX ~&r->lL @lrmK2K8SmtPK20PPPX ^/~&rrnS2lC ~&rnPrmPljASmF@rrmhPSPlD,
        num+ ~&B^?a\~&Y@a -+
           ~&l?\~&r *=r ~&K7LS+ * (*D ^\~&rr sum@lrlPX)^*D\~&r product^|/~& successor@zhl,
           ^/~&alt @alh2faltPrDPMX -+
              ~&rFS+ num*rSS+ zipt^*D/~&r ^lrrSPT/~&ltK33tx zipt^/~&r ~&lSNyCK33+ zipp0,
              ^/~&rx ~&B->NlNSPC ~&bt+-+-+-,
     @t =>~&l ~&L+@r)+-</lang>

UMFPACK doesn't solve systems with more equations than unknowns, so the system is pruned to a square matrix by first selecting an equation containing only a single variable, then selecting one from those remaining that contains only a single variable not already selected, and so on until all variables are covered, with any remaining unselected equations discarded. A random selection is made whenever there is a choice. This method will cope with larger data sets than feasible using dense and overdetermined matrices, but is less robust in the presence of noise. However, some improvement may be possible by averaging the results over several runs. Here is a test program. <lang Ursala>h = <<<-6.,-8.,-5.,9.>,<-7.,9.,-6.,-8.>,<2.,-7.,9.,8.>>,<<7.,4.,4.,-6.>,<9.,9.,4.,-4.>,<-3.,7.,-2.,-3.>>> f = <<<-9.,5.,-8.>,<3.,5.,1.>>,<<-1.,-7.,2.>,<-5.,-6.,6.>>,<<8.,5.,8.>,<-2.,-6.,-4.>>>

g =

<

  <
     <54.,42.,53.,-42.,85.,-72.>,
     <45.,-170.,94.,-36.,48.,73.>,
     <-39.,65.,-112.,-16.,-78.,-72.>,
     <6.,-11.,-6.,62.,49.,8.>>,
  <
     <-57.,49.,-23.,52.,-135.,66.>,
     <-23.,127.,-58.,-5.,-118.,64.>,
     <87.,-16.,121.,23.,-41.,-12.>,
     <-19.,29.,35.,-148.,-11.,45.>>,
  <
     <-55.,-147.,-146.,-31.,55.,60.>,
     <-88.,-45.,-28.,46.,-26.,-144.>,
     <-12.,-107.,-34.,150.,249.,66.>,
     <11.,-15.,-34.,27.,-78.,-50.>>,
  <
     <56.,67.,108.,4.,2.,-48.>,
     <58.,67.,89.,32.,32.,-8.>,
     <-42.,-31.,-103.,-30.,-23.,-8.>,
     <6.,4.,-26.,-10.,26.,12.>>>
  1. cast %eLLLm

test =

<

  'h': deconv3(g,f),
  'f': deconv3(g,h)>

</lang> output:

<
   'h': <
      <
         <
            -6.000000e+00,
            -8.000000e+00,
            -5.000000e+00,
            9.000000e+00>,
         <
            -7.000000e+00,
            9.000000e+00,
            -6.000000e+00,
            -8.000000e+00>,
         <
            2.000000e+00,
            -7.000000e+00,
            9.000000e+00,
            8.000000e+00>>,
      <
         <
            7.000000e+00,
            4.000000e+00,
            4.000000e+00,
            -6.000000e+00>,
         <
            9.000000e+00,
            9.000000e+00,
            4.000000e+00,
            -4.000000e+00>,
         <
            -3.000000e+00,
            7.000000e+00,
            -2.000000e+00,
            -3.000000e+00>>>,
   'f': <
      <
         <-9.000000e+00,5.000000e+00,-8.000000e+00>,
         <3.000000e+00,5.000000e+00,1.000000e+00>>,
      <
         <-1.000000e+00,-7.000000e+00,2.000000e+00>,
         <-5.000000e+00,-6.000000e+00,6.000000e+00>>,
      <
         <8.000000e+00,5.000000e+00,8.000000e+00>,
         <-2.000000e+00,-6.000000e+00,-4.000000e+00>>>>