Bioinformatics/base count: Difference between revisions
Content added Content deleted
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def main (): |
def main (): |
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def DispCount ( |
def DispCount () : |
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return f'\n\nBases :\n\n' + f''.join ( [ f'{i} =\t{D [ i ]:4d}\n' for i in sorted ( BoI ) ] ) |
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return S |
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other = All - BoI |
other = All - BoI |
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D |
D = { k : S.count ( k ) for k in All } |
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print ( 'Sequence:\n\n') |
print ( 'Sequence:\n\n') |
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print ( ''.join ( [ f'{k:4d} : {S [ k: k + 50 ]}\n' for k in range ( 0, len ( S ), 50 ) ] ) ) |
print ( ''.join ( [ f'{k:4d} : {S [ k: k + 50 ]}\n' for k in range ( 0, len ( S ), 50 ) ] ) ) |
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print ( f'{DispCount ( |
print ( f'{DispCount ()} \n------------') |
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print ( '' if ( other == set () ) else f'Other\t{sum ( [ D [ k ] for k in sorted ( other ) ] ):4d}\n\n' ) |
print ( '' if ( other == set () ) else f'Other\t{sum ( [ D [ k ] for k in sorted ( other ) ] ):4d}\n\n' ) |
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pass |
pass |
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